Browse of TCMCG002C05005 protein

CDS

Accession Number	TCMCG002C05005
gbkey	CDS
Protein Id	XP_020084916.1
Location	join(<9847038..9847138,9847551..9847744,9848070..9848830,9851533..9851613,9851718..9851783,9851874..9851951,9852441..9852668,9852791..9852922,9853048..9853221,9853333..9853518,9855977..9856365,9857186..9857300)
Gene	LOC109707797
GeneID	109707797
Organism	Ananas comosus

Protein

Length	834aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA371634
db_source	XM_020229327.1
Definition	probable cleavage and polyadenylation specificity factor subunit 1, partial [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor subunit 1
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   TTAAAGGTTCTTGAGACAGCTGATGATTTGGGAGAGGTTACTGAAACTGTTGATTATTATGTACATGGAAGTACAATTGCTGCAGGTAACTTATTTGGAAGGAGACGAGTTATTCAGATATACGCAAAGGGTGCACGTATACTAGATGGTTCTTACATGACCCAGGAATTGAATTTTGTTGCACATAATTCTGAGCAAACGTCTAGCGAATTGCCGACAGTGGCGTCTGTTTCTATAGCTGATCCTTATGTGTTATTGAAAATGACTGATGGAAGCATTCAATTGCTCCTTGGAGATCCTGCCGCTTGCACTGTTTCTCTTAATGCCCCTGCTATATTTTCAAGCTCAACAGAACCAATATCTGCATGTACACTTTATCATGATAAAGGACCGGAACCGTGGCTTCGAAAGACGAGCACTGATGCATGGCTTTCTACTGGTGTTGCCGAGCCAATTGATGGGAATGATGGATCATATCATGACCACGGTGACATATATTGTTTAGTTTGTTATGAAAATGGCAAACTTGAAATTTTCGATGTGCCTAGCTTTAAAAGTGTTTACTCTGTGGACAACTTTGTTTCTGGAAAGACTTATCTGGCGGATACATATACTAAAGACCCCAACAAATATCCTGATACTAAAGGCTATCTAAATAAGGAACCAGTGCAGAATATGAGAGTGGTCGAGCTGGCTATGCAAAGGTGGTCTGGCCGATACAGTCGTCCTTTTCTTTTTGGAATGCTGAGTGATGGGACAATTCTTTGCTACCATGCTTACTTTTACGAGGGTACAGAAAATGCTGTAAAAGGTGGAGATCCAGTTTCCCCTCGTGGTTCTGCGGACACAAGTAGTATGAGCATTTCAAGGCTGAGAAATTTGAGATTTCTTCGTGTTTCTATTGATATCACTACACGAGAAGAAATGTTGAATGCTGTGAGTAGGCCAAGAATTACTGTATTTAATAATGTGGGAGGCTATCAAGGTTTGTTTCTTAGTGGTTCAAGGCCAGCATGGCTCATGGTCTGCAGAGAACGGATTCGGGTACATCCGCAGCTATGCGATGGTTCCATAGCAGCTTTTGCTGTTCTTCACAATGTAAATTGCAATCATGGTCTTATATATGTTACATCACAGGGTTACCTAAAAATTTGTCAGCTGCCGTCGTCATTTAACTATGACAACCACTGGCCAGTTCAAAAGATTCCTTTGCTGGGCACTCCACATCAAGTCACCTATTATGCCGAAAAGAATCTATATCCACTTATTTTATCTGTTCCTGTTATCCGTCCTTTAAATCAGGTCCTTTCATCTCTGTTGGATCAAGAAATGAGCCAGCAGATAGATAACGACAACTTCAATTCTGATGATCTGCAAAAGACTTATAGTGTTGATGAATTTGAGGTCCGAATATTGGAGCCAGATAAATCTGGTCACTGGGATACTAAGGCTACTGTTCCAATGCAGACCTCTGAAAATGCCCTTACAGTCCGCATTGTTACGTTATTTAATACAACAACAAAAGAGAATGAATCTCTCATGGCCATTGGCACTGCTTATGTGCAAGGAGAGGATGTAGCTGCTCGTGGACGAGTGCTTCTGTTTTCTTTTGCCAAAACTAATGAGAGCTCCCAAAATCTGATTTCAGAAGTCTACTCTAAGGAGCTGAAGGGTGCCGTCTCAAATTTAGCATCTCTTCAGGGTCACTTGCTTATAGCTTCTGGTCCAAAAATCACCTTGCATAAATGGACTGGTTCTGAGTTGAATGGTGTTGCTTTCTATGATGCTCCACTGCATGTTGTGAGCTTGAACATTGTCAAGAATTTCATCTTGTTTGGCGACGTTCATAAAAGCATATATTTCCTTAATTGGAAGGAGCAAGGTGCTCAACTAAGCTTGCTAGCAAAAGATTTTGGACCTTTAAATTGCTATGCAACTGAGTTCTTGATTGATGGTAGCACATTGAGCCTTGTCGTATCGGATGATCAAAAGAACATTCAGATCTTCTATTATGCACCAAAAATGTTGGAGAGCTGGAAAGGGCAGAAGCTTTTGTCAAGGGCAGAGTTTCATGCCGGGGCCCTTGTATCGAAGTTCTTGCGGTTACAGATGCTTCCCACTTCCTCTGATCGATCAGGTGCAACTGTGCCTGGCTCCGAAAAGACCAACCGTTTTGCTCTTCTGTTTAGCACGCTGGACGGTAGCATCGGCTGCATCGCACCGCTTGAGGAGCTCACATTCCGTCGGCTTCAGACTCTGCAAAGGAAACTAGTTGATGCTGTTCCTCATGTTTGCGGCCTGAATCCTAGATCATTCCGGCAGTTCCATTCTAACGGGAAAGCACATCGCCCTGGTCCCGATCATATGGTGGACTTTGAGCTTCTTTCTCATTATGAGATGCTGCCATTGGAGGAACAGCTGGAAATTGCTCACCAAATCGGAACGACCCGGTCGCAGATCCTTTCCAATTTTAATGATCTCTCACTGGGAACGAGTTTTCTGTGA

Protein:   LKVLETADDLGEVTETVDYYVHGSTIAAGNLFGRRRVIQIYAKGARILDGSYMTQELNFVAHNSEQTSSELPTVASVSIADPYVLLKMTDGSIQLLLGDPAACTVSLNAPAIFSSSTEPISACTLYHDKGPEPWLRKTSTDAWLSTGVAEPIDGNDGSYHDHGDIYCLVCYENGKLEIFDVPSFKSVYSVDNFVSGKTYLADTYTKDPNKYPDTKGYLNKEPVQNMRVVELAMQRWSGRYSRPFLFGMLSDGTILCYHAYFYEGTENAVKGGDPVSPRGSADTSSMSISRLRNLRFLRVSIDITTREEMLNAVSRPRITVFNNVGGYQGLFLSGSRPAWLMVCRERIRVHPQLCDGSIAAFAVLHNVNCNHGLIYVTSQGYLKICQLPSSFNYDNHWPVQKIPLLGTPHQVTYYAEKNLYPLILSVPVIRPLNQVLSSLLDQEMSQQIDNDNFNSDDLQKTYSVDEFEVRILEPDKSGHWDTKATVPMQTSENALTVRIVTLFNTTTKENESLMAIGTAYVQGEDVAARGRVLLFSFAKTNESSQNLISEVYSKELKGAVSNLASLQGHLLIASGPKITLHKWTGSELNGVAFYDAPLHVVSLNIVKNFILFGDVHKSIYFLNWKEQGAQLSLLAKDFGPLNCYATEFLIDGSTLSLVVSDDQKNIQIFYYAPKMLESWKGQKLLSRAEFHAGALVSKFLRLQMLPTSSDRSGATVPGSEKTNRFALLFSTLDGSIGCIAPLEELTFRRLQTLQRKLVDAVPHVCGLNPRSFRQFHSNGKAHRPGPDHMVDFELLSHYEMLPLEEQLEIAHQIGTTRSQILSNFNDLSLGTSFL